Cheap Flights from Heraklion to Santorini

View €50 flight on Wed, 8 Oct 2025Opens in a new window

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Cheap flights from Heraklion to Santorini (HER-JTR)

Prices were available within the past 7 days and start at €50 for one-way flights and €163 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

SKY express
Thu, 17 Jul - Mon, 21 Jul
HER
Heraklion
JTR
Santorini
€163 Return, found 14 hours ago
€163
Return
found 14 hours ago
Select SKY express flight, departing Thu, 17 Jul from Heraklion to Santorini, returning Mon, 21 Jul, priced at €163 found 14 hours ago
Aegean
Fri, 11 Jul - Tue, 15 Jul
HER
Heraklion
JTR
Santorini
€165 Return, found 6 hours ago
€165
Return
found 6 hours ago
Select Aegean flight, departing Fri, 11 Jul from Heraklion to Santorini, returning Tue, 15 Jul, priced at €165 found 6 hours ago
SKY express
Thu, 24 Jul - Mon, 28 Jul
HER
Heraklion
JTR
Santorini
€173 Return, found 1 day ago
€173
Return
found 1 day ago
Select SKY express flight, departing Thu, 24 Jul from Heraklion to Santorini, returning Mon, 28 Jul, priced at €173 found 1 day ago
SKY express
Thu, 17 Jul - Mon, 21 Jul
HER
Heraklion
JTR
Santorini
€180 Return, found 14 hours ago
€180
Return
found 14 hours ago
Select SKY express flight, departing Thu, 17 Jul from Heraklion to Santorini, returning Mon, 21 Jul, priced at €180 found 14 hours ago
SKY express
Fri, 1 Aug - Mon, 4 Aug
HER
Heraklion
JTR
Santorini
€181 Return, found 5 days ago
€181
Return
found 5 days ago
Select SKY express flight, departing Fri, 1 Aug from Heraklion to Santorini, returning Mon, 4 Aug, priced at €181 found 5 days ago
Aegean
Fri, 11 Jul - Tue, 15 Jul
HER
Heraklion
JTR
Santorini
€182 Return, found 6 hours ago
€182
Return
found 6 hours ago
Select Aegean flight, departing Fri, 11 Jul from Heraklion to Santorini, returning Tue, 15 Jul, priced at €182 found 6 hours ago

Find the cheapest month to fly from Heraklion (HER) to Santorini (JTR)

May is typically the cheapest month to fly

From €100 - €177 per traveller.

Graph displaying average flight prices per month

*Available to Expedia members.